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Allow long-running upgrade code to run separate from update Release Branching #3222: Commit 57666c1 pushed by bbimber
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Allow long-running upgrade code to run separate from update Release Branching #3221: Commit fd9b12d pushed by bbimber
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Respect custom locations for sequence import Release Branching #3220: Commit 49cf837 pushed by bbimber
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Migrate NT sequence files from flat dir to hashed structure (#378) Release Branching #3219: Commit f98c8ea pushed by bbimber
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Fix to fileSource required for indexing bug Release Branching #3218: Commit 43f4603 pushed by bbimber
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Bugfix to GLNexus Release Branching #3217: Commit 3601972 pushed by bbimber
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Bump jspdf in /jbrowse in the npm_and_yarn group across 1 directory (… Release Branching #3216: Commit bad6efb pushed by bbimber
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Bump jspdf in /jbrowse in the npm_and_yarn group across 1 directory (… Release Branching #3215: Commit bad6efb pushed by bbimber
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Fix NPE (#375) Release Branching #3214: Commit c152ed6 pushed by bbimber
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Store cdr3WithProductive with response data Release Branching #3213: Commit 0d1b5f1 pushed by bbimber
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Store cdr3WithProductive with response data Release Branching #3212: Commit 0d1b5f1 pushed by bbimber
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Bump the npm_and_yarn group across 1 directory with 2 updates (#376) Release Branching #3211: Commit b199f32 pushed by bbimber
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Bump tar in /jbrowse in the npm_and_yarn group across 1 directory (#374) Release Branching #3210: Commit 44335b5 pushed by bbimber
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Fix NPE Release Branching #3209: Commit 19e211e pushed by bbimber
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Bugfix to JBrowse processing with gff/gtf files that are pre-gzipped Release Branching #3208: Commit 1d4d7a2 pushed by bbimber
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Bugfix to expectedDefaultAssay in merge Release Branching #3207: Commit 7ab62f3 pushed by bbimber
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Support expectedDefaultAssay in merge Release Branching #3206: Commit b70e2b8 pushed by bbimber
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Enhance regex filtering in TrimmingTextArea Release Branching #3205: Commit a41120f pushed by bbimber
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Add check for null objects are Pseudobulking Release Branching #3204: Commit c74f621 pushed by bbimber
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Support new gene component Release Branching #3203: Commit 035009d pushed by bbimber
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Improve SnpEff check for existing index Release Branching #3202: Commit a847538 pushed by bbimber
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Update filename case Release Branching #3201: Commit 0ec3f23 pushed by bbimber
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Update filename case Release Branching #3200: Commit 0ec3f23 pushed by bbimber
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Support --skip-tso-trimming nimble flag Release Branching #3199: Commit 509f6bb pushed by bbimber
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Set baseUrl in PredictTcellActivation.R Release Branching #3198: Commit 8dad895 pushed by bbimber
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