Add ispyb inserts for SXT atlases and ROIs#840
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Codecov Report❌ Patch coverage is Additional details and impacted files@@ Coverage Diff @@
## main #840 +/- ##
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Coverage 53.31% 53.32%
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Files 101 102 +1
Lines 10933 11029 +96
Branches 1452 1470 +18
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+ Hits 5829 5881 +52
- Misses 4788 4828 +40
- Partials 316 320 +4 🚀 New features to boost your workflow:
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Adds the functionality to insert SXT atlas and ROI images into both the murfey and ispyb databases. For ispyb the positions are adjusted to match the thumbnail images so that they display correctly on pato.
Requires atlas locations which weren't previously needed, so makes use of the
ImagingSitetable in addition toDataCollectionGroup. ROIs are inserted into theSearchMaptable (matching GridSquare in ispyb).Relatively low test coverage as I haven't written tests for the ispyb inserts.