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@HKU-BAL

HKU CDS BioAI Laboratory

Research group led by Ruibang Luo in Computer Science, HKU. Previously known as "HKUCS Bioinformatics Algorithms Lab".

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  1. Clair3 Clair3 Public

    Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling

    Python 392 46

  2. ClairS ClairS Public

    ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling

    Python 115 11

  3. ClairS-TO ClairS-TO Public

    ClairS-TO - a deep-learning method for tumor-only somatic variant calling

    Python 97 7

  4. Gungnir Gungnir Public

    Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power

    Go 13 1

Repositories

Showing 10 of 37 repositories
  • Clair3 Public

    Clair3 - Symphonizing pileup and full-alignment for deep learning-based long-read variant calling

    HKU-BAL/Clair3's past year of commit activity
    Python 392 46 22 3 Updated Oct 5, 2026
  • ClairS Public

    ClairS: a deep-learning method for long-read tumor–normal pair somatic small variant calling

    HKU-BAL/ClairS's past year of commit activity
    Python 115 BSD-3-Clause 11 10 0 Updated Sep 11, 2026
  • ClairS-TO Public

    ClairS-TO - a deep-learning method for tumor-only somatic variant calling

    HKU-BAL/ClairS-TO's past year of commit activity
    Python 97 BSD-3-Clause 7 4 1 Updated Sep 9, 2026
  • Clair3-Connect Public
    HKU-BAL/Clair3-Connect's past year of commit activity
    Rust 1 BSD-3-Clause 0 0 0 Updated Jul 1, 2026
  • ClairS-series-model-training Public
    HKU-BAL/ClairS-series-model-training's past year of commit activity
    Shell 0 0 0 0 Updated Jun 30, 2026
  • Clair-skills Public

    The skills for Clair series variant callers

    HKU-BAL/Clair-skills's past year of commit activity
    Shell 6 0 0 0 Updated Apr 16, 2026
  • Clair3-RNA Public

    Clair3-RNA - a long-read small variant caller for RNA sequencing data

    HKU-BAL/Clair3-RNA's past year of commit activity
    Python 45 BSD-3-Clause 6 9 0 Updated Apr 16, 2026
  • Gungnir Public

    Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power

    HKU-BAL/Gungnir's past year of commit activity
    Go 13 BSD-3-Clause 1 0 0 Updated Mar 2, 2026
  • Clair-Mosaic Public

    Clair-Mosaic - a deep-learning method for long-read mosaic small variant calling

    HKU-BAL/Clair-Mosaic's past year of commit activity
    Python 9 BSD-3-Clause 0 0 0 Updated Nov 13, 2025
  • ClusterV-Web Public
    HKU-BAL/ClusterV-Web's past year of commit activity
    C 3 BSD-3-Clause 0 0 0 Updated Aug 22, 2025
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