PalamaraLab

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1. ASMC ASMC Public

   Ascertained Sequentially Markovian Coalescent

   C++ 19 2

2. FastSMC FastSMC Public

   FastSMC is a method to quickly and accurately estimate pairwise identical-by-descent (IBD) regions in the genome. FastSMC estimates the age of IBD segments and scales to large biobank datasets. htt…

   Jupyter Notebook 15 1

3. HapNe HapNe Public

   Haplotype-based inference of recent effective population size in modern and ancient DNA samples

   Python 14 2

4. quickdraws quickdraws Public

   Python 12 1

5. arg-needle-lib arg-needle-lib Public

   ARG-Needle library for representing and analyzing ancestral recombination graphs (ARGs)

   C++ 10 4

6. ASMC_legacy ASMC_legacy Public

   Ascertained Sequentially Markovian Coalescent

   Java 4 8