UPHL-BioNGS
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Repositories
Showing 10 of 12 repositories
- Wastewater-genomic-analysis Public
- General_LW_scripts Public
The scripts that UPHL uses to download things from basespace and run respective workflows
- walkercreek Public
A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.
- neissflow Public Forked from CDCgov/neissflow
Nextflow pipeline for Neisseria gonorrhoeae isolate analysis
- ICA_Modified_Nextflow_Scripts Public
To be able to run Nextflow scripts that are published on Github on ICA they must be modified because ICA does not have Nextflow do a gitpull and an ICA user cannot pass config or param files.
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