Skip to content
Navigation Menu
Sign in
Products
Platform
GitHub
Repository hosting, code review, and collaboration
Copilot
AI coding agent for tasks, projects, and automated work
Build & Ship
Actions
CI/CD and automation
Code Quality
Quality analysis, fixes, and enforcement
Codespaces
Cloud development environments
Secure
Code Security
Vulnerability detection and remediation
Secret Protection
Secret scanning and leak prevention
All Features
Developers
Learn
Documentation
Training
Certifications
Build
Build with Copilot
Customize Copilot
Integrations
Explore
Trending repos
GitHub Sponsors
Developer articles
Changelog
Changelog
Your source for the latest features, improvements, and fixes across GitHub products, all in one place.
Businesses
By Stage
Enterprises
Team
Startups
Nonprofits
By Industry
Healthcare
Financial services
Manufacturing
Government
See all industries
Evaluate GitHub
Why GitHub
Customer Stories
Business insights
Trust Center
Add-ons
GitHub Advanced Security
Enterprise-grade code security
Copilot for business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Resources
Learn & Connect
Documentation
Resource center
Blog
Events & webinars
Community Forum
Customer Stories
Integrations
Support
Customer support
Training
GitHub Status
Company
About
Partners
Changelog
GitHub Universe
GitHub Universe
The event for developers, by developers — talks, workshops, and what’s next for GitHub.
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
galaxyproject
galaxy-mcp
Repository navigation
Code
Issues
20
(20)
Pull requests
25
(25)
Actions
Projects
Security and quality
1
(1)
Insights
More
items
All pull requests
Labels
14
(14)
Milestones
0
(0)
New pull request
Search pull requests
is
:
pr
state
:
open
is:pr state:open
Clear filter
Search
Pull requests
Open
25
(25)
Closed
178
(178)
Author
Label
Projects
Milestones
Reviews
Assignee
Sort by
Newest
descending
Sort…
Sort by Newest descending
More items
Comfortable display density
Compact display density
Move the TS packages to TypeScript 7 and tsup 9
#235
·
dannon
opened
Nov 13, 2026
Member
·
·
Move the Python server to fastmcp 4
#234
·
dannon
opened
Nov 13, 2026
Member
·
·
Add an optional per-session history scope to both servers
#233
·
qchiujunhao
opened
Nov 12, 2026
Member
·
10 tasks done
·
·
Add import_workflow, and allow_tool_state_corrections on invoke_workflow
#231
·
arash77
opened
Nov 12, 2026
Member
·
5 of 10 tasks
·
·
Add UDT resource preflight from completed jobs
#230
·
georgehe23
opened
Nov 12, 2026
·
·
Preflight unsafe UDT text interpolation
#227
·
georgehe23
opened
Nov 12, 2026
·
·
Add extract_workflow_from_history on both servers
#226
·
qchiujunhao
opened
Nov 11, 2026
Member
·
9 tasks done
·
·
Lint and format the auth code
#225
·
aioue
opened
Nov 11, 2026
Contributor
·
3 of 5 tasks
·
·
gxy auth login: device flow + logout/revoke
#224
·
aioue
opened
Nov 11, 2026
Contributor
·
5 of 8 tasks
·
·
Add a device-flow client and a fake Galaxy for testing
#223
·
aioue
opened
Nov 11, 2026
Contributor
·
4 of 6 tasks
·
·
2
Use the real parameter name in the code mode search example
#222
·
ishinder
opened
Nov 10, 2026
·
·
Keep tokens in the OS keyring, in a process that can be killed
#221
·
aioue
opened
Nov 10, 2026
Contributor
·
8 of 10 tasks
·
·
gxy auth status, env and headers
#220
·
aioue
opened
Nov 10, 2026
Contributor
·
6 of 9 tasks
·
·
Use stored logins for galaxy-cli's operations, and deprecate --api-key
#219
·
aioue
opened
Nov 10, 2026
Contributor
·
5 of 8 tasks
·
·
Add gxy auth token and logout, and end-to-end tests
#218
·
aioue
opened
Nov 10, 2026
Contributor
·
3 of 6 tasks
·
·
Give two slow tests a longer timeout and stop redirects.test.ts leaking temp dirs
#217
·
aioue
opened
Nov 9, 2026
Contributor
·
·
Add gxy auth login --with-token
#216
·
aioue
opened
Nov 9, 2026
Contributor
·
4 of 6 tasks
·
·
Add a credential store for galaxy-cli logins
#215
·
aioue
opened
Nov 9, 2026
Contributor
·
2 of 4 tasks
·
·
Add gxy as a second name for galaxy-cli, and isolate tests
#214
·
aioue
opened
Nov 9, 2026
Contributor
·
4 of 5 tasks
·
·
Bump the npm-version-updates group across 1 directory with 9 updates
dependencies
javascript
#213
·
dependabot[bot]
opened
Nov 9, 2026
Bot
·
·
Answer get_job_details only for a dataset in the history it names
#208
·
konstde00
opened
Nov 4, 2026
·
3 of 4 tasks
·
·
1
Add opt-in MCP Apps cards for histories and datasets
#206
·
qchiujunhao
opened
Oct 29, 2026
Member
·
·
Update fastmcp requirement from <4,>=3.1.0 to >=3.1.0,<5 in /python in the python-version-updates group
dependencies
python
#201
·
dependabot[bot]
opened
Oct 27, 2026
Bot
·
·
1
Let invoke_workflow run a specific stored version of a workflow
#153
·
dannon
opened
Oct 6, 2026
Member
·
·
Move the pure input helpers under galaxy_mcp.ops, and stop importing the server just by importing the package
#139
·
dannon
opened
Sep 28, 2026
Member
·
·
1
You can’t perform that action at this time.