While testing this workflow with our Slurm cluster (with singularity) I could not get the test_full to work due to missing file error.
Both test,singularity and test_no_prep_genome,singularity worked without issues. I wonder if the problem is with the missing file or a local.
Error:
nextflow run main.nf -profile test_full,singularity
...
No such file: s3://nf-core-awsmegatests/clipseq/input_data/reference/GRCh38.primary_assembly.genome.fa.gz
(2).nextflow.log
While testing this workflow with our Slurm cluster (with singularity) I could not get the
test_fullto work due to missing file error.Both
test,singularityandtest_no_prep_genome,singularityworked without issues. I wonder if the problem is with the missing file or a local.Error:
(2).nextflow.log