Issues

• unable to obtain model

  kipoi/models#378 · Filter by author dongyangzheng opened on Dec 2, 2024

• Error installing models with kipoi ls

  kipoi/models#377 · Filter by author Al-Murphy opened on Sep 17, 2024

• following AttentiveChrome example fails

  kipoi/models#376 · Filter by author vjcitn opened on Sep 1, 2024

• DeepBind models unavailable for downloading (using links from models.tsv)

  kipoi/models#375 · Filter by author jiayiliujiayi opened on Aug 27, 2024
  1

• kipoi test-source dir --all not finding parent_subpath

  kipoi/models#354 · Filter by author zeitlingerlab opened on Jul 5, 2023

• Meaningful deepSEA/predict column names not output

  kipoi/models#353 · Filter by author drarwood opened on Sep 22, 2022

• KipoiSplice is not getting tested in ci

  kipoi/models#350 · Filter by author haimasree opened on Jul 29, 2022

• Review APARENT predictions

  kipoi/models#346 · Filter by author Hoeze opened on Jul 4, 2022

• APARENT - number of predictions seems off

  kipoi/models#342 · Filter by author robertzeibich opened on Jun 24, 2022
  3

• Framepool can't handle deletions such as "AT"->""

  bugContribution Welcome
  kipoi/models#242 · Filter by author KalinNonchev opened on Apr 1, 2021
  4

• Test predictions are not available for a subset of models in Kipoi

  enhancement
  kipoi/models#238 · Filter by author haimasree opened on Mar 12, 2021
  1

• KipoiSplice/4 predict_example code will not work on machines where the user does not have write permissions to /tmp/

  bug
  kipoi/models#217 · Filter by author haimasree opened on Oct 28, 2020
  1

  

• Possible to run Basenji with GPU?

  inactive
  kipoi/models#215 · Filter by author adamklie opened on Aug 27, 2020
  3

• Split models into separate repositories

  enhancement
  kipoi/models#213 · Filter by author Hoeze opened on Jun 20, 2020

• Implement Batch size restrictions

  wontfix
  kipoi/models#209 · Filter by author brechtmann opened on Feb 11, 2020
  1

• Discrepancies between nightly tests and examples on local machine.

  wontfix
  kipoi/models#208 · Filter by author brechtmann opened on Feb 11, 2020

• Framepool unclear file names

  inactive
  kipoi/models#207 · Filter by author xueqicao opened on Jan 30, 2020
  1

  

• I am trying to get the MMSplice model but it show error

  inactive
  kipoi/models#196 · Filter by author iamjalees opened on Nov 6, 2019
  

• rbp_eclip models do not accept files without 'chr' string

  bug
  kipoi/models#195 · Filter by author PedroBarbosa opened on Oct 25, 2019
  4

• SiSp model have some problem：Could not load .tbi/.csi index of example/meth_file

  bug
  kipoi/models#172 · Filter by author Licko0909 opened on Apr 26, 2019

• update licenses

  question
  kipoi/models#123 · Filter by author krrome opened on Oct 12, 2018

• Add width requirement to bed_file description

  enhancement
  kipoi/models#114 · Filter by author Avsecz opened on Sep 6, 2018
  1

• DeepCRISPR

  wontfix
  kipoi/models#100 · Filter by author Avsecz opened on Jun 29, 2018

• DeepSEA test error

  inactive
  kipoi/models#99 · Filter by author arundurvasula opened on Jun 27, 2018
  5

• Getting output to standard out (instead of writing to a VCF)

  enhancement
  kipoi/models#95 · Filter by author pjshort opened on Jun 19, 2018
  2