Issues

• import(TwoBitFile, which=) re-reads the whole 2bit index on every call, twice

  lawremi/rtracklayer#153 · Filter by author haraldn opened on Sep 14, 2026
  2

• rtracklayer giving different values compared to UCSC

  lawremi/rtracklayer#149 · Filter by author scienception opened on Mar 30, 2026
  4

• ucscTableQuery now gives error: Invalid genome :'hg38'

  lawremi/rtracklayer#148 · Filter by author kwdoyle opened on Mar 2, 2026
  16

• Issue with LiftOver: Some CpGs Not Converted from hg38 to hg37

  lawremi/rtracklayer#143 · Filter by author chiaracapp opened on Jun 26, 2025

• Compile error: too many arguments to function ‘free’

  lawremi/rtracklayer#141 · Filter by author bbimber opened on Apr 15, 2025
  8

• The internal function restfulr::read got NULL results

  lawremi/rtracklayer#139 · Filter by author shaman-yellow opened on Mar 26, 2025
  1

• ASAN error from CRAN testing

  lawremi/rtracklayer#135 · Filter by author kriemo opened on Dec 18, 2024

• appropriate message/warning suppression

  lawremi/rtracklayer#134 · Filter by author npcooley opened on Dec 16, 2024
  1

• export.bw only write the last chromosome

  lawremi/rtracklayer#132 · Filter by author lldelisle opened on Oct 2, 2024
  7

• Importing local bigwig fails on some files in windows

  lawremi/rtracklayer#128 · Filter by author LinearParadox opened on Jul 31, 2024

• export file with a semi-colon at the end of each line

  lawremi/rtracklayer#111 · Filter by author hidtak opened on Feb 26, 2024

• push -Wformat fix upstream Bioc

  lawremi/rtracklayer#110 · Filter by author LiNk-NY opened on Feb 15, 2024
  1

• restfulr can not process https

  lawremi/rtracklayer#104 · Filter by author qiyubio opened on Nov 17, 2023
  3

• Unknown track: refSeqComposite

  lawremi/rtracklayer#103 · Filter by author prc992 opened on Nov 17, 2023
  2

• Hello, I got an issue about Ucsc track, which is related to [#99 ](https://github.com/lawremi/rtracklayer/pull/99)

  lawremi/rtracklayer#102 · Filter by author jennyujin22 opened on Nov 7, 2023
  1

• libcurl function error when calling ucscGenomes()

  lawremi/rtracklayer#101 · Filter by author slsevilla opened on Oct 26, 2023
  3

• Request to Replace Sweave Vignettes with R Markdown

  lawremi/rtracklayer#87 · Filter by author sonali8434 opened on Jun 6, 2023

• cannot load rtracklayer successfully

  lawremi/rtracklayer#86 · Filter by author lexie-lee opened on Mar 29, 2023

• Openssl is not available in netConnectHttps for importing remote BigWig files

  lawremi/rtracklayer#83 · Filter by author lcolladotor opened on Feb 20, 2023
  7

• Failing on Bioc devel

  lawremi/rtracklayer#82 · Filter by author bschilder opened on Jan 20, 2023
  3

• import.bb: Error when which=NULL

  lawremi/rtracklayer#77 · Filter by author bschilder opened on Oct 1, 2022

• Unable to read remote bed.bgz

  lawremi/rtracklayer#76 · Filter by author bschilder opened on Sep 4, 2022
  7

• ucscGenomes() returns NULL

  lawremi/rtracklayer#75 · Filter by author endeneon opened on Aug 31, 2022
  2

• error import bw file

  lawremi/rtracklayer#74 · Filter by author bosmont opened on Aug 26, 2022
  3

• import.bw: Unable to read remote files

  lawremi/rtracklayer#73 · Filter by author bschilder opened on Aug 8, 2022
  2