make auto_open default to stdin/stdout when path evaluates to False #48

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1. agalitsyna

   added a commit that references this issue on Apr 8, 2022

   I/O improvement

   ...

   b002dbe
2. agalitsyna commented on Apr 8, 2022

   

   agalitsyna

   on Apr 8, 2022

   Member

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   Resolved in b002dbe with some additional improvements, such as default to stdin/stdout when "-" found instead of path.

   How about transfer to this nice class, which might further simplify this?

   pairtools/pairtools/_fileio.py

   Lines 139 to 149 in 254695a

   	class PipedIO:
   	def __init__(self, file_or_path, command, mode='r'):
   	"""
   	An experimental class that reads/writes a file, piping the contents
   	through another process.
   	Parameters
   	----------
   	file_or_path : file-like object or str
   	A path to the input/output file or an already opened
   	file-like object.
3. open2c

   locked and limited conversation to collaborators on Apr 20, 2022
4. agalitsyna

   converted this issue into a discussion #127 on Apr 20, 2022
5. agalitsyna

   added a commit that references this issue on Jun 1, 2022

   pairtools 1.0.0 updates (#117)

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   d7d0939